SNPMiner Trials by Shray Alag

 rs12979860 (38) rs6971 (31) rs9939609 (11) rs6265 (11) rs738409 (11) rs7903146 (8) rs4680 (8) rs8099917 (8) rs11200638 (6) rs429358 (6) rs10490924 (6) rs7412 (6) rs16969968 (5) rs25531 (5) rs1801133 (5) rs1800497 (5) rs1799971 (4) rs4244285 (4) rs2832407 (4) rs1045642 (4) rs1544410 (4) rs10033464 (3) rs1761667 (3) rs6166 (3) rs1042713 (3) rs2023239 (3) rs1051730 (3) rs174537 (3) rs1006737 (3) rs2230199 (3) rs1128503 (3) rs2231142 (3) rs10455872 (3) rs6313 (3) rs1061170 (3) rs776746 (3) rs4588 (3) rs2069514 (2) rs1799963 (2) rs9332739 (2) rs2032582 (2) rs3745274 (2) rs6295 (2) rs12936231 (2) rs6280 (2) rs7103572 (2) rs35599367 (2) rs13266634 (2) rs1410996 (2) rs6025 (2) rs4129267 (2) rs70991108 (2) rs174547 (2) rs1127354 (2) rs362331 (2) rs53576 (2) rs35705950 (2) rs641153 (2) rs1695 (2) rs2234246 (2) rs10741657 (2) rs1800955 (2) rs2106261 (2) rs4149056 (2) rs2234237 (2) rs362307 (2) rs3808607 (2) rs1828591 (2) rs1800470 (2) rs1024611 (2) rs12785878 (2) rs3751143 (2) rs762551 (2) rs165599 (2) rs2200733 (2) rs1150226 (2) rs4646 (2) rs3798220 (2) rs3813929 (2) rs25487 (2) rs10830963 (2) rs2472677 (2) rs2281135 (2) rs4986893 (2) rs3211938 (2) rs8050136 (2) rs1801131 (2) rs855791 (2) rs5219 (2) rs4646437 (2) rs2228570 (2) rs2070744 (1) rs1017783 (1) rs4986938 (1) rs2297201 (1) rs377637047 (1) rs2298771 (1) rs1799724 (1) rs7799039 (1) rs7041 (1) rs7586970 (1) rs8175347 (1) rs1799853 (1) rs1799732 (1) rs6190 (1) rs9344 (1) rs3918242 (1) rs7549785 (1) rs3796529 (1) rs10835211 (1) rs3570920 (1) rs1998199 (1) rs2274333 (1) rs78408340 (1) rs28363170 (1) rs2987983 (1) rs833069rs (1) rs41524547 (1) rs12529 (1) rs1042522 (1) rs11958940 (1) rs34743033 (1) rs13058338 (1) rs2043211 (1) rs5082 (1) rs6739405 (1) rs4958351 (1) rs6296 (1) rs3761624 (1) rs13333226 (1) rs179008 (1) rs4802703 (1) rs547154 (1) rs7521902 (1) rs867186 (1) rs641738 (1) rs2540923 (1) rs2297480 (1) rs1672717 (1) rs4869676 (1) rs10163409 (1) rs4869675 (1) rs236114 (1) rs6165 (1) rs700518 (1) rs11615 (1) rs3025039 (1) rs11795404 (1) rs3816527 (1) rs999737 (1) rs10836235 (1) rs1256049 (1) rs27072 (1) rs614367 (1) rs12434438 (1) rs137852620 (1) rs3853445 (1) rs35874116 (1) rs3747158 (1) rs1799930 (1) rs20432111 (1) rs5068 (1) rs1310182 (1) rs7604448 (1) rs20455 (1) rs1042714 (1) rs3114018 (1) rs2269273 (1) rs6269 (1) rs1042711 (1) rs2269272 (1) rs861529 (1) rs18011131 (1) rs9340799 (1) rs2235046 (1) rs316019 (1) rs10995190 (1) rs1260326 (1) rs4570625 (1) rs1042718 (1) rs2250656 (1) rs731236 (1) rs2307227 (1) rs41524745 (1) rs6841581 (1) rs1049353 (1) rs244072 (1) rs13208321 (1) rs35463555 (1) rs1052533 (1) rs3918226 (1) rs61747728 (1) rs4073 (1) rs904627 (1) rs2295190 (1) rs2053044 (1) rs10153820 (1) rs754203 (1) rs547987105 (1) rs2562582 (1) rs2494732 (1) rs619824 (1) rs8176528 (1) rs1360780 (1) rs833061 (1) rs16147 (1) rs72552763 (1) rs9679162 (1) rs2280964 (1) rs7975232 (1) rs1726866 (1) rs10813831 (1) rs6504950 (1) rs806380 (1) rs6856901 (1) rs45511401 (1) rs573562920 (1) rs3210140 (1) rs887829 (1) rs7221412 (1) rs628031 (1) rs20417 (1) rs2687133 (1) rs7579240 (1) rs174535 (1) rs679620 (1) rs2060793 (1) rs806377 (1) rs1800629 (1) rs66554220 (1) rs1800624 (1) rs3750920 (1) rs1042522s (1) rs10246939 (1) rs2550946 (1) rs2279744 (1) rs909253 (1) rs2071559 (1) rs1024582 (1) rs10930214 (1) rs13387042 (1) rs17601696 (1) rs2046210 (1) rs8065080 (1) rs4604006 (1) rs2002555 (1) rs757110 (1) rs2910164 (1) rs1061325 (1) rs4950928 (1) rs10994336 (1) rs11548193 (1) rs73049 (1) rs9457827 (1) rs1883112 (1) rs17782313 (1) rs12459419 (1) rs150018775 (1) rs708272 (1) rs2275163 (1) rs12762549 (1) rs10941679 (1) rs699947 (1) rs2895795 (1) rs2697153 (1) rs45500792 (1) rs30461 (1) rs550842646 (1) rs2067085 (1) rs1051931 (1) rs333 (1) rs3853839 (1) rs956572 (1) rs4900442 (1) rs3755166 (1) rs324015 (1) rs271924 (1) rs3758673 (1) rs3758674 (1) rs11572080 (1) rs4151667 (1) rs894278 (1) rs10859871 (1) rs2294918 (1) rs933226 (1) rs9657182 (1) rs571312 (1) rs20715592 (1) rs12201199 (1) rs1786378374 (1) rs13376333 (1) rs17070145 (1) rs17561 (1) rs34489327 (1) rs7571842 (1) rs11133360 (1) rs2235321 (1) rs678849 (1) rs8069645 (1) rs35059413 (1) rs6454674 (1) rs2853884 (1) rs737865 (1) rs183489969 (1) rs7333181 (1) rs1143623 (1) rs71647871 (1) rs4149032 (1) rs17037122 (1) rs1062613 (1) rs2516513 (1) rs1048661 (1) rs11126727 (1) rs11568821 (1) rs1049524 (1) rs11568820 (1) rs1049522 (1) rs172378 (1) rs10994133 (1) rs924607 (1) rs2488457 (1) rs1143633 (1) rs11039155 (1) rs1143634 (1) rs2464266 (1) rs396991 (1) rs562696473 (1) rs11126731 (1) rs8105790 (1) rs10509681 (1) rs12041331 (1) rs1805010 (1) rs6013897 (1) rs16139 (1) rs2234693 (1) rs35652124 (1) rs4693608 (1) rs961360700 (1) rs2305948 (1) rs4343 (1) rs5743844 (1) rs4883263 (1) rs10033900 (1) rs4883264 (1) rs2243250 (1) rs2241193 (1) rs17614942 (1) rs2383206 (1) rs1800592 (1) rs613872 (1) rs4803217 (1) rs11031006 (1) rs1047768 (1) rs12208357 (1) rs4488809 (1) rs1800588 (1) rs2227902 (1) rs1549339 (1) rs3184504 (1) rs2248949 (1) rs222797 (1) rs1643649 (1) rs4803455 (1) rs2853564 (1) rs780094 (1) rs2231137 (1) rs6434222 (1) rs3825942 (1) rs112735431 (1) rs751402 (1) rs9701796 (1) rs1202167 (1) rs1202168 (1) rs1202169 (1) rs12472215 (1) rs4311 (1) rs2279238 (1) rs3766404 (1) rs7349683 (1) rs3781727 (1) rs1800450 (1) rs7157609 (1) rs529802001 (1) rs2257401 (1) rs3817198 (1) rs1217414 (1) rs1045485 (1) rs2278392 (1) rs2476601 (1) rs7993418 (1) rs13181 (1) rs4673 (1) rs2097432 (1) rs324011 (1) rs1079598 (1) rs1800566 (1) rs1800682 (1) rs603965 (1) rs993607 (1) rs1790349 (1) rs1044396 (1) rs3742376 (1) rs6592052 (1) rs9332377 (1) rs16111115 (1) rs11559024 (1) rs1149222 (1) rs11870474 (1) rs25331 (1) rs2929116 (1) rs2929115 (1) rs7961953 (1) rs2242480 (1) rs4532 (1) rs222747 (1) rs105173 (1) rs2165241 (1) rs1800795 (1) rs2075606 (1) rs11648486 (1) rs35874116rs (1) rs4795541 (1) rs2282679 (1) rs7853758 (1) rs1504982 (1) rs1176713 (1) rs11249433 (1) rs12467815 (1) rs10524523 (1) rs4880 (1) rs12760457 (1) rs2062305 (1) rs3828057 (1) rs3790515 (1) rs11687951 (1) rs1800896 (1) rs254093 (1) rs4994 (1) rs4633 (1) rs1885988 (1) rs11099592 (1) rs6843082 (1) rs17611 (1) rs2228171 (1) rs1042173 (1) rs41432149 (1) rs926198 (1) rs12992677 (1) rs2305619 (1) rs1800888 (1) rs61729512 (1) rs2266782 (1) rs1653624 (1) rs664393 (1) rs2246704 (1) rs11959427 (1) rs4848306 (1) rs3765467 (1) rs2246709 (1) rs2089760 (1) rs2180439 (1) rs2242447 (1) rs2981582 (1) rs12654788 (1) rs5275 (1) rs1053230 (1) rs1906591 (1) rs2010963 (1) rs11102930 (1) rs2601126 (1) rs2854116 (1) rs2854117 (1) rs16944 (1) rs17778257 (1) rs16942 (1) rs1801282 (1) rs5751876 (1) rs762251 (1) rs3803662 (1) rs10264272 (1) rs28399433 (1) rs230561 (1) rs12654778 (1) rs4364254 (1) rs10177833 (1) rs2238071 (1) rs1801275 (1) rs10766197 (1) rs704010 (1) rs10937405 (1) rs2228480 (1) rs9526240 (1) rs17570669 (1) rs10407022 (1) rs4612666 (1) rs6746030 (1) rs889312 (1) rs243866 (1) rs2740565 (1) rs1558902 (1) rs8192620 (1) rs10865801 (1) rs58542926 (1) rs3789604 (1) rs1801260 (1) rs2273773 (1) rs10757274 (1) rs573112 (1) rs2244613 (1) rs10757278 (1) rs6330 (1) rs1056892 (1) rs11931074 (1) rs2075252 (1) rs1297860 (1) rs28459296 (1) rs2380205 (1) rs780094s (1) rs9557195 (1) rs11045585 (1) rs1801253 (1) rs1801132 (1) rs11569562 (1) rs2104772 (1) rs15524 (1) rs2854275 (1) rs2066842 (1) rs12255372 (1) rs6323 (1) rs1057910 (1) rs1051375 (1) rs544684689 (1) rs2234237r25r (1) rs6318 (1) rs9826 (1) rs7120118 (1) rs12356193 (1) rs8111699 (1) rs7270101 (1) rs17042171 (1) rs1062033 (1) rs553668 (1) rs185670819 (1) rs1405655 (1) rs6311 (1) rs518147 (1) rs10401969 (1) rs4516035 (1) rs33996649 (1) rs10276036 (1) rs1465952 (1) rs2232618 (1) rs549927573 (1) rs41308230 (1) rs2293152 (1) rs2237060 (1) rs5215 (1) rs4820059 (1) rs12329760 (1) rs12676 (1) rs11083519 (1) rs16874954 (1) rs35597368 (1) rs1799983 (1) rs5573 (1) rs2229774 (1) rs2731886 (1) rs5574 (1) rs2302616 (1) rs12221497 (1) rs4973768 (1) rs5569 (1) rs2032892 (1) rs13281615 (1) rs4820268 (1) rs10079250 (1) rs1799750 (1) rs9366637 (1) rs4148738 (1) rs10456542 (1) rs25648 (1) rs9984723 (1) rs766996587 (1) rs2398162 (1) rs7291050 (1) rs1011970 (1) rs4253728 (1) rs12143842 (1)

SNPMiner SNPMiner Trials (Home Page)

Report for SNP rs2089760

Developed by Shray Alag, 2020.
SNP Clinical Trial Gene

There is one clinical trial.

Clinical Trials

1 TGFB1 and LAMA1 Gene Polymorphisms in Turkish Children With High Myopia

The investigators aimed to investigate TGFB1 and LAMA1 gene polymorphisms in children with high myopia in order to determine the genetic basis of large myopic shifts causing severe visual impairment and complications. Seventy-four children with high myopia (≥6 diopters [D]; study group) and 77 emmetropic children (±0.5D; control group) were included. Genetic and polymorphism analyses were performed in the Medical Genetics Laboratory using DNA purified from the patients' blood samples.

NCT03451877
Conditions
  1. High Myopia
  2. Gene Mutations
Interventions
  1. Genetic: TGFB1 AND LAMA1 GENE POLYMORPHISMS
MeSH:Myopia
HPO:Myopia

evaluated polymorphisms in the LAMA1 (rs2089760) and TGFB1 (rs4803455) genes in children younger than 13 years of age with ≥6 D myopia.

Primary Outcomes

Description: evaluated polymorphisms in the LAMA1 (rs2089760) and TGFB1 (rs4803455) genes in children younger than 13 years of age with ≥6 D myopia

Measure: Genetic basis of high myopia

Time: 4 years

HPO Nodes

HP:0000545: Myopia
Genes 481
CDC45 POGZ TMEM94 NOTCH2 NONO TRIT1 MAP2K2 LIMK1 POMT1 ZNF408 CACNA1F COL11A1 NR2F1 AGK COL2A1 FGFR3 COL2A1 KIF11 EED ABCC6 TARS1 CHMP1A EMC1 GNB3 BMP4 ATP6V0A2 CLDN19 XYLT2 COL2A1 FKRP UBE3A TFAP2B LOX POMK FKTN CNGA3 KCNH1 ELN FBN1 BTD MAGEL2 SMARCAL1 SOX5 POMT2 GTF2E2 GRM6 LARGE1 ELOVL4 LRP2 DAG1 GMPPB SLC25A4 ASXL1 MYO5A AHDC1 GMPPB GTF2I AKT1 CNGB3 MYOC NSD1 LTBP2 SMS RP1 SETD5 CRYBA2 HERC1 GZF1 SDHC EMC1 C12ORF57 GNB3 UCHL1 TMEM63A GNPTG THOC6 TCF4 OCA2 HERC2 COL18A1 TWIST2 BRAF CABP4 ATP6V0A2 KIF11 MAP2K1 MAN2B1 COL11A1 LRP2 BRAF ZNF469 B3GALNT2 PWAR1 PUF60 COL4A5 GRM6 POMGNT1 FKRP COL2A1 COL12A1 FKRP BRAF FKBP14 KMT2A POMGNT1 ADAMTS10 ATP6V1A RAD21 DSE RBM10 ARL6 AP1B1 B3GLCT KCNV2 ATP6V1E1 KRAS NPAP1 FANCI RPGR KLLN SNORD116-1 THG1L PTEN CHST14 SLC2A10 ABCC6 SCO2 CRYGD VPS13B NIPBL MAP2K1 ANKRD11 JAG1 UBE3B GPAA1 LARGE1 ZEB2 COL4A1 IFIH1 USP9X CLDN16 NIPBL PRDM5 MKRN3 COL11A1 SNORD115-1 CASK BMP4 MBD5 ZNF469 BLOC1S3 WAC RAI1 SLC12A6 CHM GPR179 GLRB CNGB3 COL2A1 HDAC8 TRAPPC11 TRAPPC11 POMT1 ALDH3A2 RPL10 LRIT3 CSPP1 PIK3CA COL18A1 ZNF644 SON ADGRV1 SLC24A1 P4HA2 GNAT1 COL11A1 SKI POLR3A SEC23B TIMM8A ADAMTSL1 SMC1A PTEN NBAS IRX5 IFT122 GJC2 TCF4 FKTN GJA8 TEAD1 B3GALNT2 NDN COL2A1 PCYT1A DYRK1A CBS UBE3B WHRN AKT1 PACS1 RHOA POMT1 DNAJC21 NDUFB11 ATAD3A ERBB3 TRNT1 CTNNB1 FBN2 COL1A2 MKRN3-AS1 CRYAA GNAT2 TCF4 GPR179 CYP1B1 USH2A MYO7A NSUN2 EXOSC2 WDR19 YME1L1 OPTN TUB RPL10 PDE6H LARGE1 CHST14 ARCN1 LRIT3 COL9A1 SNRPN GJA1 TRPM1 FKTN LIG4 POLR3A COL2A1 LAMA1 PAX2 DAG1 TYR POLR3A DYRK1A KRAS B3GALT6 SH2B1 CBS EXOC6B PLOD1 IFT122 USP9X PLOD3 LRPAP1 COL11A1 COL9A3 B3GALT6 AGBL5 TBC1D7 ADAMTS2 POLR3B TCF20 FBN1 MSX2 MIR140 FKBP14 AMMECR1 WDR35 SAG FKRP OAT SETD2 BFSP2 SMS COL2A1 FBN1 ATP6V0A2 POMGNT1 CLIP2 VARS1 PIGT NYX SETD5 POGZ TTC8 NRAS KIAA0586 KLHL7 RECQL4 PIK3R1 POMT2 PTEN CACNA1F MAN2B1 BAZ1B ALDH18A1 KDM5C P4HTM C8ORF37 AGK GMPPB AFF4 RFC2 GPR143 BCL11B FKRP PMM2 POMT1 LOXL3 IFT43 USP7 ATRX LAMA1 ATF6 CACNA1F GLE1 CRYBA4 ERCC3 PTPN11 NT5C2 POMT1 FBN1 MAGEL2 TBC1D24 CDK8 MAP2K2 SETD5 COL2A1 MED12L RAI1 PRDM5 TBC1D24 MPLKIP HDAC8 COL2A1 GTPBP2 KAT6A PRIMPOL NONO PSMD12 CAMK2G COL11A1 POMT2 GPAA1 HUWE1 PTEN MAGEL2 COL5A1 WDR19 ZSWIM6 KCNE5 CRYBB1 CPSF1 USF3 POMGNT1 CACNA2D4 ACOX1 ZSWIM6 TRPM1 HACE1 LAMB2 SDHD ADAMTSL4 IFT52 COL4A4 GRK1 CYP4V2 SLITRK6 BPTF ELP1 TKFC ASXL1 MYOC POLR3B FKTN RERE ADAMTS17 TFAP2A SLC39A5 WAC LTBP2 ENPP1 BBS1 GTF2IRD1 AEBP1 ARR3 POLR1C PACS2 AKT1 NFIX DEAF1 MED13L COX7B HADHA SKI ERCC2 POMT2 HS6ST2 CRYGC CACNA1F SMC3 CCDC28B HSPG2 TAF1 FBN1 MBTPS2 FLII DPYD COL4A3 SMC3 VPS13B OAT IPW NT5C2 APC2 PPP2R5D ATAD3A RHO CLDN19 COL2A1 TULP1 MC1R RPGR PDE6B NYX RAB28 P3H2 FBN1 COL9A2 ANTXR1 HSPG2 PWRN1 IGF1 COL4A3 OPN1LW EIF2S3 PDZD7 AMMECR1 CCNQ CRYBB2 RIN2 HTT EPHA2 POMT2 ARID1B WDR26 HACE1 POMGNT1 ACSL4 GJA1 SOX5 SDHB OPN1MW RNF113A COL9A2 PDE6C PIK3CA TBL2 RP2 MAF VCAN POMT2 IQSEC2 XYLT1 COL2A1 GTF2H5 NSD1 RMRP PLOD1 LTBP2 KDM5B ZEB2 COL2A1 SIM1 EFL1 COL9A1 CRIPT ADAMTS10 FBXW11 CANT1
Protein Mutations 0
SNP 2
rs2089760 rs4803455