SNPMiner Trials by Shray Alag


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Report for Mutation G143E

Developed by Shray Alag, 2020.
SNP Clinical Trial Gene

There are 3 clinical trials

Clinical Trials


1 Characterisation of the Human Carboxylesterase 1 (CES1) Mutation(s) Which May be Responsible for Markedly Reduced Conversion of Oseltamivir Phosphate to Oseltamivir Carboxylate

The aim of this study is to evaluate the conversion of OP to OC in individual X and the family member of individual X. The investigators hypothesize that one or more of the single nucleoprotein polymorphisms (SNPs) of the CES1 gene represent a clinically important functional polymorphism.

NCT01443806 Metabolic Disease Drug: Oseltamivir
MeSH:Metabolic Diseases

A study from Zhu HJ et al presented potentially 2 functional polymorphisms locating in exon 4 (Gly143Glu) and 6 (Asp260fs) that can impair the CES1 hydrolytic activity to methylphenidate in vitro. --- Gly143Glu ---

Primary Outcomes

Description: Conversion of Oseltamivir at 2 and 4 hours post dose

Measure: Tmax

Time: 2 and 4 hours

Secondary Outcomes

Description: Document the sequence of all 14 exons of CES1 from individual X and the family members of individual X.

Measure: Conversion of oseltamivir phosphate to oseltamivir carboxylate

Time: one year (anticipate)

2 Genetic Determinants of ACEI Prodrug Activation

Angiotensin-converting enzyme inhibitors (ACEIs) are among the most frequently prescribed medications worldwide for the treatment of essential hypertension, left ventricular systolic dysfunction, acute myocardial infarction, and prevention of the progression of diabetic nephropathy. However, the outcome of ACEI treatment varies significantly between individuals and selected populations. Suboptimal response, therapeutic failure, and significant side effects are commonly documented in patients receiving ACEI therapy. Approximately 80% of the ACEIs available for use in the US are synthesized as esterified prodrugs in order to improve otherwise poor oral bioavailability of the active molecule. The activation of ACEI prodrugs primarily occurs in the liver via metabolic de-esterification of the parent drug. The critical activation step is essential in delivering a successful therapeutic outcome since the active metabolites are approximately 10-1000 times more potent relative to their respective parent compounds. Carboxylesterase 1 (CES1), the most abundant hydrolase in the liver, is responsible for the activation of ACEI prodrugs in humans. Marked interindividual variability in CES1 expression and activity has been documented, which results in varied therapeutic efficacy and tolerability of many drugs serving as substrates of CES1. Genetic variation of CES1 is considered to be a major factor contributing to variability in CES1 function. The study team proposes to conduct a multiple-dose healthy volunteer study to evaluate the impact of CES1 genetic variation on the activation, pharmacokinetics, and pharmacodynamics of enalapril, a model ACEI prodrug activated by CES1. The completion of this study will represent a major step towards the establishment of an evidence base from which a more individualized use of ACEI prodrugs can emerge.

NCT03051282 Healthy Volunteers Drug: Enalapril

To compare the mean AUC of enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groups. --- G143E ---

To compare the maximum enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groupsG143E carriers groups. --- G143E ---

To compare the plasma ACE activity between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment. --- G143E ---

To compare the changes of BPs between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment. --- G143E ---

- A positive urine pregnancy test in the MCRU prior to the study - No subjects weighing under 50 kg will be selected - The lack of use of acceptable methods of birth control unless abstinent - Subjects who regularly take medications, vitamins, herbal supplements - The use of any illicit drugs or habitual consumption of large quantities of ethanol (>3 drinks/day) - The consumption of grapefruit or grapefruit juice a week prior to, and during the study - Asians will not be included in the study as the CES1 SNP G143E is absent in this population - Subjects hypersensitive to enalapril - Subject with a history of angioedema - Smokers Inclusion Criteria: - Subjects must be male and female (50:50) between the ages of 18-55 years - Females must have a negative urine pregnancy test prior to the study - All subjects must have no clinically significant diseases or clinically significant abnormal laboratory values as assessed during the screening medical history, nursing assessment, and laboratory evaluations - Informed consent must be signed by the eligible subject prior to the initiation of any study procedures Exclusion Criteria: - The presence of a known medical condition that would preclude the use of enalapril - The presence of any surgical or medical condition (active or chronic) that may interfere with drug absorption, distribution, metabolism, or excretion. --- G143E ---

- A positive urine pregnancy test in the MCRU prior to the study - No subjects weighing under 50 kg will be selected - The lack of use of acceptable methods of birth control unless abstinent - Subjects who regularly take medications, vitamins, herbal supplements - The use of any illicit drugs or habitual consumption of large quantities of ethanol (>3 drinks/day) - The consumption of grapefruit or grapefruit juice a week prior to, and during the study - Asians will not be included in the study as the CES1 SNP G143E is absent in this population - Subjects hypersensitive to enalapril - Subject with a history of angioedema - Smokers Healthy Volunteers null --- G143E ---

Primary Outcomes

Description: To compare the mean AUC of enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groups

Measure: The measurements of the mean area under the curve (AUC) of enalaprilat plasma concentrations

Time: 72 hours

Secondary Outcomes

Description: To compare the maximum enalaprilat plasma concentrations between the non-carrier control and the G143E carriers groupsG143E carriers groups

Measure: The measurements of the maximum enalaprilat plasma concentrations

Time: 72 hours

Description: To compare the plasma ACE activity between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment

Measure: The measurements of angiotensin converting enzyme (ACE) activity in plasma

Time: 72 hours

Description: To compare the changes of BPs between the non-carrier control and the G143E carriers groupsG143E carriers groups following enalapril treatment

Measure: The measurements of blood pressures (BPs) following enalapril treatment

Time: 72 hours

3 Carboxylesterase 1 Genetic Variation and Methylphenidate in ADHD

The study team will determine the association between d,l-methylphenidate (MPH) therapeutic outcomes in ADHD patients and genetic variants of CES1 and reveal key associations between CES1 genotypes and the PK and PD of MPH.

NCT03781752 ADHD Attention Deficit Hyperactivity Disorder Drug: Methylphenidate
MeSH:Attention Deficit Disorder with Hyperactivity
HPO:Attention deficit hyperactivity disorder

The first clinically significant CES1 variant G143E (rs71647871), discovered in the study team's lab during the course of a healthy volunteer MPH PK study, led to gross impairments in MPH metabolism. --- G143E ---

The study team has established the minor allele frequency (MAF) of the G143E variant as 3-4% in the general population. --- G143E ---

G143E carrier's frequency 6-8%) with a genetically impaired ability to metabolize/deactivate the drug will receive it - exposing them to high systemic concentrations of MPH and any attendant risks or toxicities. --- G143E ---

The study team's hypothesis is that the CES1 variants, such as the G143E and D203E, can significantly alter the expression and/or activity of CES1, thereby influencing the metabolism and disposition of MPH. --- G143E ---

Primary Outcomes

Description: The maximum plasma concentration achieved after dosing.

Measure: Maximum methylphenidate plasma concentration (Cmax),

Time: up to 8 Hours

Secondary Outcomes

Description: The time after administration of a drug when the maximum plasma concentration is reached; when the rate of absorption equals the rate of elimination.

Measure: Time to maximum concentration (Tmax)

Time: up 8 hours

Description: Area under the plasma concentration-time curve from time zero to the last measurable concentration.

Measure: Area under the plasma concentration curve (AUClast)

Time: up to 8 hours

Description: Area under the plasma concentration-time curve from time zero to infinity.

Measure: Area under the plasma concentration curve (AUCinf)

Time: up to 8 hours


HPO Nodes


HP:0007018: Attention deficit hyperactivity disorder
Genes 272
PPM1D DRD4 DNM1 DHCR7 SLC6A8 LIMK1 PTCHD1 CLCN4 TSC2 SCN3A STS DHTKD1 STAG2 SLC13A5 PMS2 SIM1 ACTL6B LHCGR FTSJ1 EPCAM HOXA2 KIF11 ELN CNKSR2 UPF3B GABRG2 UPF3B DRD5 SLC1A2 PWAR1 CLTC SETBP1 ATP6V1A NIPBL GNAQ GNE RAI1 RAB39B HCFC1 TSC1 SCN8A FGFR3 SCN8A ARHGEF6 TBX1 DYM HSPG2 SYNJ1 MED12 CACNA1H WWOX CHRNA7 MLH3 GNB5 TRAK1 CXORF56 MSH2 GALC RREB1 SEMA3E CPLX1 ADNP TSC2 NTRK2 NPAP1 CHD7 ARX CRBN ABCD1 BCORL1 SPRED1 TMCO1 IL1RAPL1 DYNC1I2 SMC3 GABRA2 RAI1 SH3KBP1 FGD1 NKAP PIEZO2 YY1 FLI1 RSRC1 GABRG2 MLXIPL CACNA1B TGFBR2 CNKSR2 C12ORF4 SMPD1 YWHAG RAD21 MCTP2 IGF1 CNKSR2 ARVCF RPS6KA3 MID2 RERE NDN IKBKG MAPK1 STS GLUD1 IQSEC2 SEMA4A ASPM HDC BAZ1B MED13 TAF1 WAC CYFIP2 UBE3A TBC1D24 NDP TSPAN7 SIN3A ALKBH8 MECP2 OCRL HERC2 ZDHHC9 TLK2 DPP6 AP3B2 EEF1A2 MAGEL2 GP1BB KCNB1 SMC1A GTF2IRD1 PIK3CA UFD1 RIC1 STXBP1 FAN1 SNORD115-1 NUS1 CACNA1A MKRN3-AS1 PTCHD1 ACSL4 SH2B1 GRIN2A TET3 RFC2 GNE GABRG2 PCNT GRIN2D LIG4 PANK2 CDK8 GTF2I PRKCG IFNG BMPR1A FOXP1 USP27X CLTC KIF14 DEAF1 SRPX2 SPG7 SIN3A SNRPN CLIP2 CRKL COMT NECAP1 GABRA1 GRIN2A SZT2 OPHN1 SH2B1 JMJD1C AARS1 FMR1 UBA5 SOX5 VPS13A NOP56 ARV1 PCGF2 ALG13 AGTR2 AUTS2 HIRA BCR IQSEC2 YWHAG PAK3 GRIA4 TBX1 NSUN2 MSH6 PMS1 MKRN3 JRK TBX1 GABRB3 PARS2 ZNF41 RERE MLH1 DPH1 FLII SETD5 CIC FRMPD4 KRAS KCNA2 TKT ZNF711 TRIO SNORD116-1 ELN PPP3CA MED12 DLG3 FGD1 GABRB2 GATA4 SYP TSC1 TRIO TBL2 CSNK2A1 GDI1 DMD SETD5 SLC9A7 PHIP TBX1 POLA1 PWRN1 MED12 RPS20 USP7 KMT2A TUBB2B MAP11 SATB2 FGF12 DNAJC12 DHDDS HDAC4 TIMM8A SEC24C GABRA5 PAH PRNP THRB IPW TKT ARF1 USP9X RAI1 KCNA2 NBN HCN1 SLC2A1 NR2F1 SYNGAP1 MED12 HDAC8 SLITRK1 ARID2 ZNF81 PAH
Protein Mutations 2
D203E G143E